Change Point Detection#
statista.time_series.changepoint
#
Change point detection mixin for TimeSeries.
ChangePoint
#
Bases: _TimeSeriesStub
Change point detection methods for TimeSeries.
Implements Pettitt, SNHT, and Buishand range tests from scratch following the algorithms in pyhomogeneity (Moges et al., 2020). All tests detect a single change point in the mean of a time series.
Source code in src\statista\time_series\changepoint.py
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pettitt_test(alpha=DEFAULT_ALPHA, column=None)
#
Pettitt non-parametric change point test.
Tests the null hypothesis that the series is homogeneous (no change point). Uses rank-based U statistic. P-value computed analytically.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
alpha
|
float
|
Significance level. Default 0.05. |
DEFAULT_ALPHA
|
column
|
str
|
Column to test. If None, tests all columns. |
None
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
pandas.DataFrame: One row per column with: h, change_point_index, statistic, p_value, mean_before, mean_after, conclusion. |
Examples:
Detect a change point in a series with a mean shift at index 50:
>>> import numpy as np
>>> from statista.time_series import TimeSeries
>>> np.random.seed(42)
>>> data = np.concatenate([np.random.randn(50), np.random.randn(50) + 3])
>>> ts = TimeSeries(data)
>>> result = ts.pettitt_test()
>>> result.loc["Series1", "conclusion"]
'Inhomogeneous'
>>> int(result.loc["Series1", "change_point_index"])
49
>>> round(float(result.loc["Series1", "mean_before"]), 4)
-0.2255
>>> round(float(result.loc["Series1", "mean_after"]), 4)
3.0178
Confirm homogeneity in pure random noise:
>>> np.random.seed(42)
>>> ts_noise = TimeSeries(np.random.randn(100))
>>> result_noise = ts_noise.pettitt_test()
>>> result_noise.loc["Series1", "conclusion"]
'Homogeneous'
>>> round(float(result_noise.loc["Series1", "p_value"]), 4)
0.5597
References
Pettitt, A.N. (1979). A non-parametric approach to the change-point problem. Applied Statistics, 28(2), 126-135.
Source code in src\statista\time_series\changepoint.py
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snht_test(alpha=DEFAULT_ALPHA, column=None)
#
Standard Normal Homogeneity Test (SNHT).
Detects a shift in the mean by comparing standardized sub-period means.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
alpha
|
float
|
Significance level. Default 0.05. |
DEFAULT_ALPHA
|
column
|
str
|
Column to test. If None, tests all columns. |
None
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
pandas.DataFrame: One row per column with: h, change_point_index, statistic, p_value, mean_before, mean_after, conclusion. |
Examples:
Detect a shift in a series with a mean change at index 50:
>>> import numpy as np
>>> from statista.time_series import TimeSeries
>>> np.random.seed(42)
>>> data = np.concatenate([np.random.randn(50), np.random.randn(50) + 3])
>>> ts = TimeSeries(data)
>>> result = ts.snht_test()
>>> result.loc["Series1", "conclusion"]
'Inhomogeneous'
>>> int(result.loc["Series1", "change_point_index"])
49
>>> round(float(result.loc["Series1", "statistic"]), 4)
75.8692
>>> round(float(result.loc["Series1", "mean_before"]), 4)
-0.2255
Verify a homogeneous series is not flagged:
>>> np.random.seed(42)
>>> ts_noise = TimeSeries(np.random.randn(100))
>>> result_noise = ts_noise.snht_test()
>>> result_noise.loc["Series1", "conclusion"]
'Homogeneous'
>>> round(float(result_noise.loc["Series1", "p_value"]), 4)
0.1
References
Alexandersson, H. (1986). A homogeneity test applied to precipitation data. Journal of Climatology, 6(6), 661-675.
Source code in src\statista\time_series\changepoint.py
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buishand_range_test(alpha=DEFAULT_ALPHA, column=None)
#
Buishand range test for change point detection.
Uses adjusted partial sums to detect a shift in the mean.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
alpha
|
float
|
Significance level. Default 0.05. |
DEFAULT_ALPHA
|
column
|
str
|
Column to test. If None, tests all columns. |
None
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
pandas.DataFrame: One row per column with: h, change_point_index, statistic, p_value, mean_before, mean_after, conclusion. |
Examples:
Detect a change point using the Buishand range statistic:
>>> import numpy as np
>>> from statista.time_series import TimeSeries
>>> np.random.seed(42)
>>> data = np.concatenate([np.random.randn(50), np.random.randn(50) + 3])
>>> ts = TimeSeries(data)
>>> result = ts.buishand_range_test()
>>> result.loc["Series1", "conclusion"]
'Inhomogeneous'
>>> int(result.loc["Series1", "change_point_index"])
49
>>> round(float(result.loc["Series1", "statistic"]), 4)
4.3551
Verify a homogeneous series passes the test:
>>> np.random.seed(42)
>>> ts_noise = TimeSeries(np.random.randn(100))
>>> result_noise = ts_noise.buishand_range_test()
>>> result_noise.loc["Series1", "conclusion"]
'Homogeneous'
>>> round(float(result_noise.loc["Series1", "p_value"]), 4)
0.0819
References
Buishand, T.A. (1982). Some methods for testing the homogeneity of rainfall records. Journal of Hydrology, 58(1-2), 11-27.
Source code in src\statista\time_series\changepoint.py
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cusum(column=None, plot=True, **kwargs)
#
Cumulative sum (CUSUM) of deviations from the mean.
Visual method for detecting shifts. A sustained upward/downward drift indicates a change in the mean.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
column
|
str
|
Column to analyze. If None, uses first column. |
None
|
plot
|
bool
|
Whether to produce a CUSUM plot. Default True. |
True
|
**kwargs
|
Any
|
Passed to |
{}
|
Returns:
| Name | Type | Description |
|---|---|---|
tuple |
tuple[DataFrame, tuple[Figure, Axes] | None]
|
(cusum_df, (fig, ax)) or (cusum_df, None) if plot=False. cusum_df has the cumulative sums with same index as input. |
Examples:
Compute CUSUM of deviations from the mean (no plot):
>>> import numpy as np
>>> from statista.time_series import TimeSeries
>>> np.random.seed(42)
>>> ts = TimeSeries(np.random.randn(100))
>>> cusum_df, _ = ts.cusum(plot=False)
>>> cusum_df.shape[0]
100
>>> round(float(cusum_df.iloc[0, 0]), 4)
0.6006
>>> round(float(cusum_df.iloc[:, 0].abs().max()), 4)
6.5078
CUSUM on a series with a mean shift:
>>> np.random.seed(42)
>>> data = np.concatenate([np.random.randn(50), np.random.randn(50) + 3])
>>> ts2 = TimeSeries(data)
>>> cusum_df2, _ = ts2.cusum(plot=False)
>>> round(float(cusum_df2.iloc[-1, 0]), 4)
0.0
Plot-based usage (creates a figure): # doctest: +SKIP
Source code in src\statista\time_series\changepoint.py
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homogeneity_summary(alpha=DEFAULT_ALPHA)
#
Run Pettitt + SNHT + Buishand and combine into a diagnosis.
If 2 or more tests agree on a change point location (within +/-2 indices), the result is marked as "confirmed".
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
alpha
|
float
|
Significance level for all tests. Default 0.05. |
DEFAULT_ALPHA
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
pandas.DataFrame: One row per column with test results and confirmation status. |
Examples:
All three tests agree on a change point at index 49:
>>> import numpy as np
>>> from statista.time_series import TimeSeries
>>> np.random.seed(42)
>>> data = np.concatenate([np.random.randn(50), np.random.randn(50) + 3])
>>> ts = TimeSeries(data)
>>> result = ts.homogeneity_summary()
>>> bool(result.loc["Series1", "confirmed"])
True
>>> int(result.loc["Series1", "pettitt_cp"])
49
>>> int(result.loc["Series1", "snht_cp"])
49
Homogeneous series is not confirmed as having a change point:
>>> np.random.seed(42)
>>> ts_noise = TimeSeries(np.random.randn(100))
>>> result_noise = ts_noise.homogeneity_summary()
>>> bool(result_noise.loc["Series1", "confirmed"])
False
Source code in src\statista\time_series\changepoint.py
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